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Book Chapter
F. Faure, Duriez, C., Delingette, H., Allard, J., Gilles, B., Marchesseau, S., Talbot, H., Courtecuisse, H., Bousquet, G., Peterlik, I., and Cotin, S., SOFA: A Multi-Model Framework for Interactive Physical Simulation, in Soft Tissue Biomechanical Modeling for Computer Assisted Surgery, vol. 11, Y. Payan, Ed. Springer Berlin Heidelberg, 2012, pp. 283-321.
Journal Article
C. M. Costa, Gondim, D. D., Gondim, D. D., Soares, H. B., Ribeiro, A. G. C. D., Silva, I., Winkler, E., Celi, L., Guerreiro, A. M. G., and Leite, C. R. M., S2DIA: a diagnostic system for Diabetes mellitus using SANA platform., Conf Proc IEEE Eng Med Biol Soc, vol. 2012, pp. 6078-81, 2012.
M. C. Hiner, Rueden, C. T., and Eliceiri, K. W., {SCIFIO}: an extensible framework to support scientific image formats, BMC bioinformatics, vol. 17, p. 521, 2016.
A. N. Tolopko, Sullivan, J. P., Erickson, S. D., Wrobel, D., Chiang, S. L., Rudnicki, K., Rudnicki, S., Nale, J., Selfors, L. M., Greenhouse, D., Muhlich, J. L., and Shamu, C. E., Screensaver: an open source lab information management system (LIMS) for high throughput screening facilities., BMC bioinformatics, vol. 11, p. 260, 2010.
B. Muhoza, Remera, E., Shi, Q., Kabahizi, J., Brazier, E., Sinayobye, Jd'Amour, and Duda, S. N., Secondary Data Use in Rwanda: Leveraging OpenMRS for Global HIV Research., Stud Health Technol Inform, vol. 264, p. 1732, 2019.
H. Leroux, McBride, S., and Gibson, S., On selecting a clinical trial management system for large scale, multi-centre, multi-modal clinical research study., Stud Health Technol Inform, vol. 168, pp. 89-95, 2011.
C. G. Chute, Pathak, J., Savova, G. K., Bailey, K. R., Schor, M. I., Hart, L. A., Beebe, C. E., and Huff, S. M., The {SHARPn} project on secondary use of {Electronic} {Medical} {Record} data: progress, plans, and possibilities, AMIA .. Annual Symposium proceedings. AMIA Symposium, vol. 2011, pp. 248–256, 2011.
D. Haak, Samsel, C., Gehlen, J., Jonas, S., and Deserno, T. M., Simplifying electronic data capture in clinical trials: workflow embedded image and biosignal file integration and analysis via web services., J Digit Imaging, vol. 27, no. 5, pp. 571-80, 2014.
A. Updegrove, Wilson, N. M., Merkow, J., Lan, H., Marsden, A. L., and Shadden, S. C., {SimVascular}: {An} {Open} {Source} {Pipeline} for {Cardiovascular} {Simulation}, Annals of Biomedical Engineering, 2016.
S. Berisha, Chang, S., Saki, S., Daeinejad, D., He, Z., Mankar, R., and Mayerich, D., {SIproc}: an open-source biomedical data processing platform for large hyperspectral images, The Analyst, 2016.
J. C. Crane, Olson, M. P., and Nelson, S. J., SIVIC: Open-source, standards-based software for DICOM MR spectroscopy workflows, International Journal of Biomedical Imaging, vol. 2013, 2013.
K. D. Mandl, Mandel, J. C., Murphy, S. N., Bernstam, E. V., Ramoni, R. L., Kreda, D. A., McCoy, M. J., Adida, B., and Kohane, I. S., The SMART Platform: early experience enabling substitutable applications for electronic health records., J Am Med Inform Assoc, 2012.
Y. Liu, Hu, J., Snell-Feikema, I., VanBemmel, M. S., Lamsal, A., and Wimberly, M. C., Software to Facilitate Remote Sensing Data Access for Disease Early Warning Systems., Environ Model Softw, vol. 74, pp. 247-257, 2015.
T. J. Hannan, Solving a Health Information Management Problem. An international success story., World Hosp Health Serv, vol. 51, no. 2, pp. 32-5, 2015.
T. Good and DiTommaso, M., SQL Clinic: the open-source alternative for electronic medical records., Psychiatr Serv, vol. 56, no. 3, pp. 269-71, 2005.
M. T. Hirschmann, Wagner, C. R., Rasch, H., and Henckel, J., Standardized volumetric 3D-analysis of SPECT/CT imaging in orthopaedics: overcoming the limitations of qualitative 2D analysis., BMC Med Imaging, vol. 12, no. 1, p. 5, 2012.
S. Marceglia, Fontelo, P., Rossi, E., and Ackerman, M. J., A Standards-Based Architecture Proposal for Integrating Patient mHealth Apps to Electronic Health Record Systems., Appl Clin Inform, vol. 6, no. 3, pp. 488-505, 2015.
P. M. Yellowlees, Marks, S. L., Hogarth, M., and Turner, S., Standards-based, open-source electronic health record systems: a desirable future for the U.S. health industry., Telemedicine journal and e-health : the official journal of the American Telemedicine Association, vol. 14, no. 3, pp. 284-8, 2008.
B. Janamanchi, Katsamakas, E., Raghupathi, W., and Gao, W., The state and profile of open source software projects in health and medical informatics., International journal of medical informatics, vol. 78, no. 7, pp. 457-72, 2009.
M. Alsaffar, Yellowlees, P., Odor, A., and Hogarth, M., The State of Open Source Electronic Health Record Projects: A Software Anthropology Study., JMIR Med Inform, vol. 5, no. 1, p. e6, 2017.
A. Abdirad, Sarrafpour, B., and Ghaderi-Sohi, S., Static telepathology in cancer institute of Tehran university: report of the first academic experience in Iran., Diagn Pathol, vol. 1, p. 33, 2006.
D. C. Gimbel, Sohani, A. R., Busarla, S. Vara Prasa, Kirimi, J. Muthoni, Sayed, S., Okiro, P., and Nazarian, R. M., A static-image telepathology system for dermatopathology consultation in East Africa: the Massachusetts General Hospital Experience., J Am Acad Dermatol, vol. 67, no. 5, pp. 997-1007, 2012.

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