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A
H. S. F. Fraser, Thomas, D., Tomaylla, J., Garcia, N., Lecca, L., Murray, M., and Becerra, M. C., “Adaptation of a web-based, open source electronic medical record system platform to support a large study of tuberculosis epidemiology.”, BMC Med Inform Decis Mak, vol. 12, p. 125, 2012.
G. van Valkenhoef, Tervonen, T., Zwinkels, T., de Brock, B., and Hillege, H., “ADDIS: a decision support system for evidence-based medicine”, Decision Support Systems, vol. in press, 2012.
J. Zhao, van Valkenhoef, G., de Brock, B., and Hillege, H., “ADDIS: an automated way to do network meta-analysis”. 2012.
S. M. Smith, Jenkinson, M., Woolrich, M. W., Beckmann, C. F., Behrens, T. E. J., Johansen-Berg, H., Bannister, P. R., De Luca, M., Drobnjak, I., Flitney, D. E., Niazy, R. K., Saunders, J., Vickers, J., Zhang, Y., De Stefano, N., Brady, M. J., and Matthews, P. M., “Advances in functional and structural MR image analysis and implementation as FSL.”, NeuroImage, vol. 23 Suppl 1, pp. S208-19, 2004.
S. M. Smith, Jenkinson, M., Woolrich, M. W., Beckmann, C. F., Behrens, T. E. J., Johansen-Berg, H., Bannister, P. R., De Luca, M., Drobnjak, I., Flitney, D. E., Niazy, R. K., Saunders, J., Vickers, J., Zhang, Y., De Stefano, N., Brady, M. J., and Matthews, P. M., “Advances in functional and structural MR image analysis and implementation as FSL.”, NeuroImage, vol. 23 Suppl 1, pp. S208-19, 2004.
S. M. Smith, Jenkinson, M., Woolrich, M. W., Beckmann, C. F., Behrens, T. E. J., Johansen-Berg, H., Bannister, P. R., De Luca, M., Drobnjak, I., Flitney, D. E., Niazy, R. K., Saunders, J., Vickers, J., Zhang, Y., De Stefano, N., Brady, M. J., and Matthews, P. M., “Advances in functional and structural MR image analysis and implementation as FSL.”, NeuroImage, vol. 23 Suppl 1, pp. S208-19, 2004.
S. M. Smith, Jenkinson, M., Woolrich, M. W., Beckmann, C. F., Behrens, T. E. J., Johansen-Berg, H., Bannister, P. R., De Luca, M., Drobnjak, I., Flitney, D. E., Niazy, R. K., Saunders, J., Vickers, J., Zhang, Y., De Stefano, N., Brady, M. J., and Matthews, P. M., “Advances in functional and structural MR image analysis and implementation as FSL.”, NeuroImage, vol. 23 Suppl 1, pp. S208-19, 2004.
M. C. Villa-Uriol, Larrabide, I., Geers, A. J., Pozo, J., Bogunovic, H., Mazzeo, M., Omedas, P., Barbarito, V., Carotenuto, L., Riccobene, C., Planes, X., Martelli, Y., and Frangi, A. F., “AngioLab: Integrated technology for patient-specific management of intracranial aneurysms.”, Conference proceedings : .. Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference, vol. 1, pp. 6801-4, 2010.
M. C. Villa-Uriol, Larrabide, I., Geers, A. J., Pozo, J., Bogunovic, H., Mazzeo, M., Omedas, P., Barbarito, V., Carotenuto, L., Riccobene, C., Planes, X., Martelli, Y., and Frangi, A. F., “AngioLab: Integrated technology for patient-specific management of intracranial aneurysms.”, Conference proceedings : .. Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference, vol. 1, pp. 6801-4, 2010.
B
M. W. Woolrich, Jbabdi, S., Patenaude, B., Chappell, M., Makni, S., Behrens, T., Beckmann, C., Jenkinson, M., and Smith, S. M., “Bayesian analysis of neuroimaging data in FSL.”, NeuroImage, vol. 45, no. 1 Suppl, pp. S173-86, 2009.
M. W. Woolrich, Jbabdi, S., Patenaude, B., Chappell, M., Makni, S., Behrens, T., Beckmann, C., Jenkinson, M., and Smith, S. M., “Bayesian analysis of neuroimaging data in FSL.”, NeuroImage, vol. 45, no. 1 Suppl, pp. S173-86, 2009.
A. Bessani, Brandt, J., Bux, M., Cogo, V., Dimitrova, L., Dowling, J., Gholami, A., Hakimzadeh, K., Hummel, M., Ismail, M., Laure, E., Leser, U., Litton, J. - E., Martinez, R., Niazi, S., Reichel, J., and Zimmermann, K., “BiobankCloud: A Platform for the Secure Storage, Sharing, and Processing of Large Biomedical Data Sets”, in Biomedical Data Management and Graph Online Querying: VLDB 2015 Workshops, Big-O(Q) and DMAH, Waikoloa, HI, USA, August 31 – September 4, 2015, Revised Selected Papers, F. Wang, Luo, G., Weng, C., Khan, A., Mitra, P., and Yu, C., Eds. Cham: Springer International Publishing, 2016, pp. 89–105.
A. Bessani, Brandt, J., Bux, M., Cogo, V., Dimitrova, L., Dowling, J., Gholami, A., Hakimzadeh, K., Hummel, M., Ismail, M., Laure, E., Leser, U., Litton, J. - E., Martinez, R., Niazi, S., Reichel, J., and Zimmermann, K., “BiobankCloud: A Platform for the Secure Storage, Sharing, and Processing of Large Biomedical Data Sets”, in Biomedical Data Management and Graph Online Querying: VLDB 2015 Workshops, Big-O(Q) and DMAH, Waikoloa, HI, USA, August 31 – September 4, 2015, Revised Selected Papers, F. Wang, Luo, G., Weng, C., Khan, A., Mitra, P., and Yu, C., Eds. Cham: Springer International Publishing, 2016, pp. 89–105.
A. Bessani, Brandt, J., Bux, M., Cogo, V., Dimitrova, L., Dowling, J., Gholami, A., Hakimzadeh, K., Hummel, M., Ismail, M., Laure, E., Leser, U., Litton, J. - E., Martinez, R., Niazi, S., Reichel, J., and Zimmermann, K., “BiobankCloud: A Platform for the Secure Storage, Sharing, and Processing of Large Biomedical Data Sets”, in Biomedical Data Management and Graph Online Querying: VLDB 2015 Workshops, Big-O(Q) and DMAH, Waikoloa, HI, USA, August 31 – September 4, 2015, Revised Selected Papers, F. Wang, Luo, G., Weng, C., Khan, A., Mitra, P., and Yu, C., Eds. Cham: Springer International Publishing, 2016, pp. 89–105.
B. Parvin, Yang, Q., Fontenay, G., and Barcellos-Hoff, M. H., “BioSig: an imaging bioinformatics system for phenotypic analysis.”, IEEE transactions on systems, man, and cybernetics. Part B, Cybernetics : a publication of the IEEE Systems, Man, and Cybernetics Society, vol. 33, no. 5, pp. 814-24, 2003.
F. Tadel, Baillet, S., Mosher, J. C., and Pantazis, D., “Brainstorm: A User-Friendly Application for MEG/EEG Analysis”, Computational Intelligence and Neuroscience, vol. 2011, 2011.
S. Rea, Pathak, J., Savova, G., Oniki, T. A., Westberg, L., Beebe, C. E., Tao, C., Parker, C. G., Haug, P. J., Huff, S. M., and Chute, C. G., “Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: The SHARPn project.”, J Biomed Inform, 2012.
C
J. J. Cimino, Hayamizu, T. F., Bodenreider, O., Davis, B., Stafford, G. A., and Ringwald, M., “The caBIG terminology review process.”, J Biomed Inform, vol. 42, no. 3, pp. 571-80, 2009.
L. Becnel Boyd, Hunicke-Smith, S. P., Stafford, G. A., Freund, E. T., Ehlman, M., Chandran, U., Dennis, R., Fernandez, A. T., Goldstein, S., Steffen, D., Tycko, B., and Klemm, J. D., “The caBIG® Life Science Business Architecture Model.”, Bioinformatics, vol. 27, no. 10, pp. 1429-35, 2011.
A. Neinstein, Wong, J., Look, H., Arbiter, B., Quirk, K., McCanne, S., Sun, Y., Blum, M., and Adi, S., “A case study in open source innovation: developing the Tidepool Platform for interoperability in type 1 diabetes management.”, J Am Med Inform Assoc, 2015.
E. M. Weber, Seaman, V. Y., Stewart, R. N., Bird, T. J., Tatem, A. J., McKee, J. J., Bhaduri, B. L., Moehl, J. J., and Reith, A. E., “Census-independent population mapping in northern Nigeria.”, Remote Sens Environ, vol. 204, pp. 786-798, 2018.
E. M. Weber, Seaman, V. Y., Stewart, R. N., Bird, T. J., Tatem, A. J., McKee, J. J., Bhaduri, B. L., Moehl, J. J., and Reith, A. E., “Census-independent population mapping in northern Nigeria.”, Remote Sens Environ, vol. 204, pp. 786-798, 2018.
H. Ming Seah, Burney, M., Phan, M., Shell, D., Wu, J., Zhou, K., Brooks, O., Coulton, B., Maingard, J., Tang, J., Yazdabadi, G., Tahayori, B., Barras, C., Kok, H. Kuan, Chandra, R., Thijs, V., Brooks, D. Mark, and Asadi, H., “CODE STROKE ALERT-Concept and Development of a Novel Open-Source Platform to Streamline Acute Stroke Management.”, Front Neurol, vol. 10, p. 725, 2019.
H. Ming Seah, Burney, M., Phan, M., Shell, D., Wu, J., Zhou, K., Brooks, O., Coulton, B., Maingard, J., Tang, J., Yazdabadi, G., Tahayori, B., Barras, C., Kok, H. Kuan, Chandra, R., Thijs, V., Brooks, D. Mark, and Asadi, H., “CODE STROKE ALERT-Concept and Development of a Novel Open-Source Platform to Streamline Acute Stroke Management.”, Front Neurol, vol. 10, p. 725, 2019.
H. Ming Seah, Burney, M., Phan, M., Shell, D., Wu, J., Zhou, K., Brooks, O., Coulton, B., Maingard, J., Tang, J., Yazdabadi, G., Tahayori, B., Barras, C., Kok, H. Kuan, Chandra, R., Thijs, V., Brooks, D. Mark, and Asadi, H., “CODE STROKE ALERT-Concept and Development of a Novel Open-Source Platform to Streamline Acute Stroke Management.”, Front Neurol, vol. 10, p. 725, 2019.

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