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The 'epi' R Package

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The Epi package is mainly focused on "classical" chronic disease epidemiology. The package has grown out of the course Statistical Practice in Epidemiology using R.

CONNECT

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CONNECT is an open source software solution that supports health information exchange – both locally and at the national level. CONNECT uses Nationwide Health Information Network (NHIN) standards and governance to make sure that health information exchanges are compatible with other exchanges being set up throughout the country.

JULIDE

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JULIDE is a software toolkit developed to perform the 3D reconstruction, intensity normalization, volume standardization by 3D image registration and voxel-wise statistical analysis of autoradiographs of mouse brain sections.

PyEEG

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A Python function library to extract EEG feature from EEG time series in standard Python and numpy data structure. Features include classical spectral analysis, entropies, fractal dimensions, DFA, inter-channel synchrony and order, etc.

Oviyam

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Oviyam is a web based DICOM Viewer. Using standard DICOM protocols patient lists can be queried, particular series or studies retrieved and be displayed as JPEG images in your browser. Oviyam will work with any DICOM server that supports WADO (Web Access to DICOM Persistent Objects).

Oviyam is a free download and is pre-packaged for deployment with JBoss.
The source is triple licensed under MPL 1.1/GPL 2.0/LGPL 2.1.

Oviyam is built using the dcm4che toolkit and script.aculo.us framework.

OpenGPSoC

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The openGPSoC project came to life in September 2012 after a conversation at NHS Hack Day ’2′ in Liverpool. The idea of a fully open source GP clinical system has been suggested and discussed many times in the past, however due to the stringent requirements of any such software it is recognised as a very hard thing to try to achieve. While we recognised this difficulty, we also felt there were a number of opportunities at present which might make such a project possible.

The R Project for Statistical Computing

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R is a language and environment for statistical computing and graphics. It is a GNU project which is similar to the S language and environment which was developed at Bell Laboratories (formerly AT&T, now Lucent Technologies) by John Chambers and colleagues. R can be considered as a different implementation of S. There are some important differences, but much code written for S runs unaltered under R."

Utilities For Patient Data Exchange (UPDE)

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Utilities for Patient Data Exchange. A parser for text files to use with some of the utilities provided by the DCMTK from Offis. The purpose is to provide a basic DICOM Modality Worklist Management SCP.

Real-time Outbreak and Disease Surveillance (RODS)

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"Real-time Outbreak and Disease Surveillance (RODS) is open-source public health surveillance software. RODS collects and analyzes disease surveillance data in real time and has been in development since 1999 by the RODS Laboratory. In 2002, the Utah Department of Health used the software for monitoring during the Winter Olympics Games. At present, health departments and other groups in the United States, Canada and Taiwan use the software."

Laika

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Laika analyzes and reports on the interoperability capabilities of EHR systems. This includes the testing for certification of EHR software products and networks.

To support EHR data interoperability testing, Laika is designed to verify the input and output of EHR data against the standards and criteria identified by the Certification Commission for Health Information Technology (CCHIT). Laika is used by the Certification Commission to perform part of the interoperability certification inspection of EHRs.

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