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dicompyler is an extensible, fully open source radiation therapy research platform based on the DICOM standard. It also functions as a cross-platform viewer for DICOM and DICOM RT objects. dicompyler is written in Python and is built on pydicom, wxPython, PIL, and matplotlib and runs on Windows, Mac OS X and Linux.
The goal of OpenIGTLink is to provide a standardized mechanism to connect software/hardware through the network for image-guided therapy (IGT) applications. The features of OpenIGTLink include:
GIMIAS is a workflow-oriented environment for solving advanced biomedical image computing and individualized simulation problems, which is extensible through the development of problem-specific plug-ins. In addition, GIMIAS provides an open source framework for efficient development of research and clinical software prototypes integrating contributions from the Physiome community while allowing business-friendly technology transfer and commercial product development.
GIMIAS suites are collections of prototypes that build a complete platform for one or more clinical applications.
MassChroQ (Mass Chromatogram Quantification) software performs quantification of data obtained from mass-spectrometry techniques. It is particularly well suited for peptide quantification of LC-MS (Liquid Chromatography - Mass Spectrometry) data. It performs chromatographic alignment, XIC extraction, peak detection and quantification on identified peptides, with or without isotopic labeling, on high or low resolution data and it takes into account peptide or protein fractionation.
Apache clinical Text Analysis and Knowledge Extraction System (cTAKES) is an open-source natural language processing system for information extraction from electronic medical record clinical free-text. It processes clinical notes, identifying types of clinical named entities from various dictionaries including the Unified Medical Language System (UMLS) - medications, diseases/disorders, signs/symptoms, anatomical sites and procedures.
PsychoPy is an open-source application to allow the presentation of stimuli and collection of data for a wide range of neuroscience, psychology and psychophysics experiments. It’s a free, powerful alternative to Presentation™ or e-Prime™ . It’s written in Python (a free alternative to Matlab™ ) and combines the graphical strengths of OpenGL with the easy Python syntax to give psychophysics a free and simple stimulus presentation and control package.
Our mission is to revolutionize healthcare delivery in remote areas through innovative mobile information services that improve patient access to medical specialists for faster, high quality, and more cost effective diagnosis and intervention.
Based on the work and contributions of students, volunteers, partner organizations, and sponsors, Sana offers an open source data collection and collaboration platforms for clinical research and best practice health care delivery for underserved rural populations.
MRIdb is an end-to-end data management system for MRI, combining the DCM4CHEE DICOM server with a bespoke front-end packaged into an easily deployable virtual machine. It interfaces directly with MRI scanners and handles image storage, retrieval and export. It provides role-based access control, patient-study assignment, and extensive auditing. MRIdb is the result of an ongoing collaboration between the BSS and the Imaging Sciences Department of Imperial College.
SCIRun is a problem solving environment or "computational workbench" in which a user selects software modules that can be connected in a visual programing environment to create a high level workflow for experimentation. Each module exposes all the available parameters necessary for scientists to adjust the outcome of their simulation or visualization. The networks in SCIRun are flexible enough to enable duplication of networks and creation of new modules.
"According to the homepage: "After nearly 10 years, the openCDMS system..."
posted by holger on openCDMS 6 years 8 months
"For details about the fork see these discussions FreeHealth 7 years 1 month
"Glucosio wins award from Black Duck for top new OSS projects in 2015!
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posted by demski on Glucosio 8 years 1 week
"Free D Path in 2014 won an award in the category of ‘best use of IT to..."
posted by demski on Free D Path 9 years 1 month
"AuShadha Open Source EMR has moved to Django 1.7.x
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posted by dreaswar on AuShadha 9 years 5 months